PDB ID:  pdb_00005ti9
  • Crystal structure of human TDO in complex with Trp and dioxygen, Northeast Structural Genomics Consortium Target HR6161
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • Deposition date: 2016-10-01
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others E (OXYStructure of OXYOXY ), G (TRPStructure of TRPTRP ), H (TRPStructure of TRPTRP ), I (PO4Structure of PO4PO4 ), J (OXYStructure of OXYOXY ), L (TRPStructure of TRPTRP ), M (TRPStructure of TRPTRP ), N (PO4Structure of PO4PO4 ), P (NFKStructure of NFKNFK ), Q (TRPStructure of TRPTRP ), S (NFKStructure of NFKNFK ), T (TRPStructure of TRPTRP )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 39-388 (18-389)
Mutations (UniProt numbering)
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme F
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 38-381 (18-389)
Mutations (UniProt numbering)
Missing residues 173VAL-180TYR
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme K
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.21 Å
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 40-391 (18-389)
Mutations (UniProt numbering)
Missing residues 171MET-180TYR:241ILE-256GLU
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme O
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 39-382 (18-389)
Mutations (UniProt numbering)
Missing residues 244LYS-247SER:338SER-345SER
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme R
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å