PDB ID:  pdb_00006dhz
  • Crystallographic octamer of a metal-free RIDC1 variant bearing two disulfide bonded cysteines
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • Deposition date: 2018-05-21
Number of assemblies:  1
Assembly ID:  1  (author_defined_assembly)    
Structural data modeled
Oligomeric count 8
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others F (CAStructure of CACA ), F-1 (CAStructure of CACA ), G (CAStructure of CACA ), G-1 (CAStructure of CACA ), I (CAStructure of CACA ), I-1 (CAStructure of CACA ), J (CAStructure of CACA ), J-1 (CAStructure of CACA ), L (CAStructure of CACA ), L-1 (CAStructure of CACA ), M (CAStructure of CACA ), M-1 (CAStructure of CACA ), O (CAStructure of CACA ), O-1 (CAStructure of CACA )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme E
Available structure PDB
Chain A-1 heme  
auth_asym_id A
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme E-1
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme H
Available structure PDB
Chain B-1 heme  
auth_asym_id B
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme H-1
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Missing residues 45PRO-51LYS
Structural gaps Exists
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme K
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain C-1 heme  
auth_asym_id C
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Missing residues 45PRO-51LYS
Structural gaps Exists
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme K-1
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Missing residues 43ALA-49GLU
Structural gaps Exists
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme N
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å
Chain D-1 heme  
auth_asym_id D
Residue indices (Uniprot) 1-106 (23-128)
Mutations (UniProt numbering)
Missing residues 43ALA-49GLU
Structural gaps Exists
Uniprot ID P0ABE7 →UniprotKB
label_asym_ids of heme N-1
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å