PDB ID:  pdb_00007dlk
  • Crystal Structure of veratryl alcohol bound Dye Decolorizing peroxidase from Bacillus subtilis
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • Deposition date: 2020-11-27
Number of assemblies:  3
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others FA (OXYStructure of OXYOXY ), GA (VOHStructure of VOHVOH ), H (OXYStructure of OXYOXY ), HA (GOLStructure of GOLGOL ), I (MPDStructure of MPDMPD ), IA (GOLStructure of GOLGOL ), J (GOLStructure of GOLGOL ), JA (CLStructure of CLCL ), K (GOLStructure of GOLGOL ), L (GOLStructure of GOLGOL ), M (CLStructure of CLCL ), N (PO4Structure of PO4PO4 )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 1-363 (55-416)
Mutations (UniProt numbering)
Uniprot ID P39597 →UniprotKB
label_asym_ids of heme G
Available structure PDB
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 2-363 (55-416)
Mutations (UniProt numbering)
Uniprot ID P39597 →UniprotKB
label_asym_ids of heme EA
Available structure PDB
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (OXYStructure of OXYOXY ), BA (GOLStructure of GOLGOL ), CA (CLStructure of CLCL ), DA (CLStructure of CLCL ), P (OXYStructure of OXYOXY ), Q (GOLStructure of GOLGOL ), R (CLStructure of CLCL )
Each chain information
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 3-363 (55-416)
Mutations (UniProt numbering)
Uniprot ID P39597 →UniprotKB
label_asym_ids of heme O
Available structure PDB
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 2-362 (55-416)
Mutations (UniProt numbering)
Uniprot ID P39597 →UniprotKB
label_asym_ids of heme Z
Available structure PDB
Assembly ID:  3  (author_and_software_defined_assembly)    
Structural data PDB
Oligomeric count 2
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others LA (OXYStructure of OXYOXY ), MA (EPEStructure of EPEEPE ), NA (GOLStructure of GOLGOL ), OA (GOLStructure of GOLGOL ), PA (GOLStructure of GOLGOL ), QA (GOLStructure of GOLGOL ), RA (CLStructure of CLCL ), SA (CLStructure of CLCL ), T (OXYStructure of OXYOXY ), U (VOHStructure of VOHVOH ), V (MPDStructure of MPDMPD ), W (GOLStructure of GOLGOL ), X (GOLStructure of GOLGOL ), Y (CLStructure of CLCL )
Each chain information
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 1-363 (55-416)
Mutations (UniProt numbering)
Uniprot ID P39597 →UniprotKB
label_asym_ids of heme S
Available structure PDB
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 3-362 (55-416)
Mutations (UniProt numbering)
Uniprot ID P39597 →UniprotKB
label_asym_ids of heme KA
Available structure PDB