Danish

PDB ID: pdb_00007pi0

Unstacked compact Dunaliella PSII
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposition date: 2021-08-19

Number of assemblies: 1

Assembly ID: 0 (author_and_software_defined_assembly)
Structural data	modeled
Oligomeric count	50
label_asym_ids of protein	50 chains (4 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, Z
label_asym_ids of heme	LK RD
label_asym_ids of the others	show AB (CL), AC (BCR), AD (DGD), AE (LMG), AF (CLA), AG (XAT), AH (CLA), AI (BCR), AJ (LMG), AK (LHG), AL (CLA), AM (CLA), AN (CLA), AO (CHL), BB (CL), BC (BCR), BD (DGD), BE (DGA), BF (CHL), BG (NEX), BH (CLA), BI (SQD), BJ (3PH), BK (SQD), BL (CLA), BM (CLA), BN (CLA), BO (CHL), CB (CLA), CC (C7Z), CD (LMG), CE (LMG), CF (CHL), CG (LHG), CH (CLA), CI (NA), CJ (DGA), CK (SPH), CL (CHL), CM (CLA), CN (CLA), CO (CLA), DB (CLA), DC (LMG), DD (LMG), DE (CHL), DF (CHL), DG (CHL), DH (CHL), DI (BCT), DJ (SQD), DK (FE2), DL (CHL), DM (CLA), DN (CHL), DO (CHL), EB (CLA), EC (DGD), ED (SQD), EE (CLA), EF (CHL), EG (CLA), EH (CHL), EI (LHG), EJ (LMT), EK (PHO), EL (CHL), EM (CLA), EN (CHL), EO (CLA), FB (PHO), FC (3PH), FD (LMG), FE (CLA), FF (CHL), FG (CLA), FH (CHL), FI (LHG), FJ (BCR), FK (CLA), FL (CHL), FM (LUT), FN (CHL), FO (CLA), GB (CLA), GC (LHG), GD (SPH), GE (CLA), GF (CLA), GG (CLA), GH (CLA), GI (3PH), GJ (CLA), GK (CLA), GL (CLA), GM (LUT), GN (CLA), GO (CLA), HB (BCR), HC (LMT), HD (PHO), HE (CHL), HF (CLA), HG (CLA), HH (CHL), HI (CLA), HJ (CLA), HK (PL9), HL (CLA), HM (NEX), HN (CLA), HO (CLA), IB (NA), IC (SQD), ID (DGA), IE (CHL), IF (CLA), IG (CHL), IH (CLA), II (CLA), IJ (CLA), IK (LHG), IL (CLA), IM (LHG), IN (CLA), IO (CLA), JB (3PH), JC (CLA), JD (BCT), JE (CHL), JF (CLA), JG (CHL), JH (CLA), JI (CLA), JJ (CLA), JK (LMG), JL (CLA), JM (XAT), JN (CLA), JO (LUT), KB (CLA), KC (CLA), KD (CLA), KE (CHL), KF (CLA), KG (CHL), KH (CLA), KI (CLA), KJ (CLA), KK (LMG), KL (CLA), KM (DGD), KN (CLA), KO (LUT), LB (CLA), LC (CLA), LD (CLA), LE (CHL), LF (LUT), LG (CLA), LH (CLA), LI (CLA), LJ (CLA), LL (LUT), LM (CLA), LN (CLA), LO (NEX), MB (CLA), MC (CLA), MD (PL9), ME (CLA), MF (LUT), MG (CLA), MH (CLA), MI (CLA), MJ (CLA), MK (BCR), ML (LUT), MM (CLA), MN (CLA), MO (LHG), NB (CLA), NC (CLA), ND (LHG), NE (CLA), NF (NEX), NG (CLA), NH (LUT), NI (CLA), NJ (CLA), NK (RRX), NL (NEX), NM (CLA), NN (LUT), NO (PTY), OB (CLA), OC (CLA), OD (LHG), OE (CLA), OF (LHG), OG (CLA), OH (LUT), OI (CLA), OJ (CLA), OK (LMG), OL (LHG), OM (CHL), ON (LUT), PB (CLA), PC (CLA), PD (LMG), PE (CLA), PF (XAT), PG (CLA), PH (NEX), PI (CLA), PJ (CLA), PK (SPH), PL (XAT), PM (CHL), PN (NEX), QB (CLA), QC (CLA), QD (LMG), QE (CLA), QF (CLA), QG (CLA), QH (LHG), QI (CLA), QJ (CLA), QK (DGA), QL (PTY), QM (CLA), QN (LHG), RB (CLA), RC (CLA), RE (LUT), RF (CLA), RG (CLA), RH (PTY), RI (CLA), RJ (CLA), RK (SQD), RL (CHL), RM (CLA), RN (LPX), SB (CLA), SC (CLA), SD (BCR), SE (LUT), SF (CLA), SG (LUT), SH (OEX), SI (CLA), SJ (CLA), SK (LHG), SL (CLA), SM (CLA), SN (3PH), TB (CLA), TC (CLA), TD (RRX), TE (NEX), TF (CHL), TG (LUT), TH (CL), TI (CLA), TJ (BCR), TK (SQD), TL (CLA), TM (CLA), TN (CHL), UB (CLA), UC (CLA), UD (SPH), UE (LHG), UF (CHL), UG (NEX), UH (CL), UI (CLA), UJ (BCR), UK (SQD), UL (CLA), UM (LUT), UN (XAT), VB (CLA), VC (CLA), VD (DGA), VE (XAT), VF (CLA), VG (LHG), VH (CLA), VI (CLA), VJ (DGD), VK (DGA), VL (CHL), VM (XAT), VN (CHL), WB (CLA), WC (BCR), WD (BCR), WE (PTY), WF (CLA), WG (LPX), WH (CLA), WI (CLA), WJ (DGD), WK (LMG), WL (CHL), WM (NEX), WN (CLA), XB (CLA), XC (BCR), XD (LHG), XE (CHL), XF (CLA), XG (3PH), XH (CLA), XI (BCR), XJ (DGD), XK (BCR), XL (CHL), XM (LHG), XN (CLA), YA (OEX), YB (CLA), YC (BCR), YD (SQD), YE (CLA), YF (CLA), YG (XAT), YH (PHO), YI (BCR), YJ (LMG), YK (CHL), YL (CHL), YM (CHL), YN (CLA), ZA (FE2), ZB (CLA), ZC (DGD), ZD (SQD), ZE (CLA), ZF (LUT), ZG (CHL), ZH (CLA), ZI (C7Z), ZJ (LMG), ZK (CLA), ZL (CHL), ZM (CLA), ZN (CHL)

Each chain information

Showing all 50 chains (4 with heme). Show only chains with heme

Chain A
auth_asym_id	A
Residue indices (Uniprot)	9-344 (9-344)
Uniprot ID	D0FY08 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain AA
auth_asym_id	b
Residue indices (Uniprot)	2-485 (2-485)
Missing residues	218CYS-218CYS
Nonstandard amino acids	CSD
Uniprot ID	A0A1C8XRM6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain B
auth_asym_id	B
Residue indices (Uniprot)	2-485 (2-485)
Missing residues	218CYS-218CYS
Nonstandard amino acids	CSD
Uniprot ID	A0A1C8XRM6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.11 Å

Chain BA
auth_asym_id	v
Residue indices (Uniprot)	2-33 (2-33)
Uniprot ID	D0FY13 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	V
Residue indices (Uniprot)	2-33 (2-33)
Uniprot ID	D0FY13 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	c
Residue indices (Uniprot)	13-461 (13-461)
Uniprot ID	D0FXY3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	C
Residue indices (Uniprot)	13-461 (13-461)
Uniprot ID	D0FXY3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain DA
auth_asym_id	d
Residue indices (Uniprot)	5-352 (5-352)
Uniprot ID	A0A1C8XRK9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain E
auth_asym_id	D
Residue indices (Uniprot)	5-352 (5-352)
Uniprot ID	A0A1C8XRK9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain EA heme
auth_asym_id	e
Residue indices (Uniprot)	7-82 (7-82)
Uniprot ID	D0FY01 ￫UniprotKB
label_asym_ids of heme	LK
Available structure	PDB

Chain F heme
auth_asym_id	E
Residue indices (Uniprot)	7-82 (7-82)
Uniprot ID	D0FY01 ￫UniprotKB
label_asym_ids of heme	RD
Available structure	PDB

Chain FA heme
auth_asym_id	f
Residue indices (Uniprot)	14-44 (14-44)
Uniprot ID	D0FY18 ￫UniprotKB
label_asym_ids of heme	LK
Available structure	PDB

Chain G heme
auth_asym_id	F
Residue indices (Uniprot)	14-44 (14-44)
Uniprot ID	D0FY18 ￫UniprotKB
label_asym_ids of heme	RD
Available structure	PDB

Chain GA
auth_asym_id	h
Residue indices (Uniprot)	19-85 (15-81)
Uniprot ID	A0A1C8XRP3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	H
Residue indices (Uniprot)	19-85 (15-81)
Uniprot ID	A0A1C8XRP3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	i
Residue indices (Uniprot)	1-35 (1-35)
Uniprot ID	D0FXX5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	I
Residue indices (Uniprot)	1-35 (1-35)
Uniprot ID	D0FXX5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	j
Residue indices (Uniprot)	7-42 (8-41)
Mutations (UniProt numbering)	T7I, Q42L
Uniprot ID	A0A1C8XRM8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	J
Residue indices (Uniprot)	7-42 (8-41)
Mutations (UniProt numbering)	T7I, Q42L
Uniprot ID	A0A1C8XRM8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	k
Residue indices (Uniprot)	10-46 (10-46)
Uniprot ID	D0FXX2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	K
Residue indices (Uniprot)	10-46 (10-46)
Uniprot ID	D0FXX2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain KA
auth_asym_id	l
Residue indices (Uniprot)	1-38 (1-38)
Uniprot ID	D0FY19 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	L
Residue indices (Uniprot)	1-38 (1-38)
Uniprot ID	D0FY19 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain LA
auth_asym_id	m
Residue indices (Uniprot)	3-33 (3-33)
Mutations (UniProt numbering)	I9T
Uniprot ID	D0FXZ3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	M
Residue indices (Uniprot)	3-33 (3-33)
Mutations (UniProt numbering)	I9T
Uniprot ID	D0FXZ3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain MA
auth_asym_id	o
Residue indices (Uniprot)	62-299 (1-238)
Uniprot ID	A0A9J4RF13 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	O
Residue indices (Uniprot)	62-299 (1-238)
Uniprot ID	A0A9J4RF13 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain NA
auth_asym_id	p
Residue indices (Uniprot)	58-244 (1-187)
Uniprot ID	A0A9J4RF14 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	P
Residue indices (Uniprot)	58-244 (1-187)
Uniprot ID	A0A9J4RF14 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain OA
auth_asym_id	t
Residue indices (Uniprot)	1-30 (1-30)
Uniprot ID	D0FY04 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	T
Residue indices (Uniprot)	1-30 (1-30)
Uniprot ID	D0FY04 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain PA
auth_asym_id	w
Residue indices (Uniprot)	60-103 (1-44)
Uniprot ID	A0A9J4RF15 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	W
Residue indices (Uniprot)	60-103 (1-44)
Uniprot ID	A0A9J4RF15 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain QA
auth_asym_id	x
Residue indices (Uniprot)	64-93 (1-30)
Uniprot ID	A0A9J4RF16 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	X
Residue indices (Uniprot)	64-93 (1-30)
Uniprot ID	A0A9J4RF16 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain RA
auth_asym_id	z
Residue indices (Uniprot)	1-61 (1-61)
Uniprot ID	D0FXZ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	Z
Residue indices (Uniprot)	1-61 (1-61)
Uniprot ID	D0FXZ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain SA
auth_asym_id	n
Residue indices (Uniprot)	36-257 (1-222)
Uniprot ID	A0A9J4RF17 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	N
Residue indices (Uniprot)	36-257 (1-222)
Uniprot ID	A0A9J4RF17 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain TA
auth_asym_id	g
Residue indices (Uniprot)	31-251 (32-252)
Mutations (UniProt numbering)	P181A
Uniprot ID	A1XKU7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	G
Residue indices (Uniprot)	31-251 (32-252)
Mutations (UniProt numbering)	P181A
Uniprot ID	A1XKU7 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain UA
auth_asym_id	r
Residue indices (Uniprot)	59-269 (-)
Missing residues	84SER-84SER
Structural gaps	Exists
Nonstandard amino acids	SEP
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.41 Å

Chain V
auth_asym_id	R
Residue indices (Uniprot)	59-269 (-)
Missing residues	84SER-84SER
Structural gaps	Exists
Nonstandard amino acids	SEP
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB and Modeled
RMSD of experimental residues after energy minimization	0.39 Å

Chain VA
auth_asym_id	s
Residue indices (Uniprot)	47-289 (41-283)
Mutations (UniProt numbering)	E50D, L113I, Q203K, T230I, V238I, G239A, F258I, I262L
Uniprot ID	G4WUW1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	S
Residue indices (Uniprot)	47-289 (41-283)
Mutations (UniProt numbering)	E50D, L113I, Q203K, T230I, V238I, G239A, F258I, I262L
Uniprot ID	G4WUW1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain WA
auth_asym_id	y
Residue indices (Uniprot)	39-260 (40-259)
Mutations (UniProt numbering)	F77L, V92L, V106I, I110L, Q113K, G120E, A122G, S130A, P144E, T183P, D200E, T201A, A219S, F221L, E239Q, Q260T, A261P
Uniprot ID	A8BDJ0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	Y
Residue indices (Uniprot)	39-260 (40-259)
Mutations (UniProt numbering)	F77L, V92L, V106I, I110L, Q113K, G120E, A122G, S130A, P144E, T183P, D200E, T201A, A219S, F221L, E239Q, Q260T, A261P
Uniprot ID	A8BDJ0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain XA
auth_asym_id	u
Residue indices (Uniprot)	89-115 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	U
Residue indices (Uniprot)	89-115 (-)
Uniprot ID	Unavailable
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	a
Residue indices (Uniprot)	9-344 (9-344)
Uniprot ID	D0FY08 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB