Danish
PDB ID:  pdb_00007qrm
  • Cryo-EM structure of catalytically active Spinacia oleracea cytochrome b6f in complex with endogenous plastoquinones at 2.7 A resolution
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2022-01-11
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 16
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (UMQStructure of UMQUMQ ), AB (UMQStructure of UMQUMQ ), CA (SQDStructure of SQDSQD ), DA (PL9Structure of PL9PL9 ), EA (FESStructure of FESFES ), FA (PGTStructure of PGTPGT ), GA (BCRStructure of BCRBCR ), HA (UMQStructure of UMQUMQ ), IA (PL9Structure of PL9PL9 ), MA (UMQStructure of UMQUMQ ), NA (UMQStructure of UMQUMQ ), OA (PGTStructure of PGTPGT ), PA (PL9Structure of PL9PL9 ), QA (CLAStructure of CLACLA ), RA (PL9Structure of PL9PL9 ), SA (PL9Structure of PL9PL9 ), T (CLAStructure of CLACLA ), TA (UMQStructure of UMQUMQ ), U (PL9Structure of PL9PL9 ), UA (UMQStructure of UMQUMQ ), V (UMQStructure of UMQUMQ ), W (UMQStructure of UMQUMQ ), WA (SQDStructure of SQDSQD ), X (PGTStructure of PGTPGT ), XA (PGTStructure of PGTPGT ), Y (PL9Structure of PL9PL9 ), YA (FESStructure of FESFES ), Z (UMQStructure of UMQUMQ ), ZA (BCRStructure of BCRBCR )
Each chain information

Showing all 16 chains (6 with heme). Show only chains with heme

Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 2-215 (1-215)
Uniprot ID P00165 ￫UniprotKB
label_asym_ids of heme S ,  R ,  Q
Available structure PDB
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 2-160 (1-160)
Uniprot ID P00166 ￫UniprotKB
label_asym_ids of heme S
Available structure PDB
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 1-285 (1-320)
Uniprot ID P16013 ￫UniprotKB
label_asym_ids of heme BA
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 8-179 (1-230)
Missing residues 46GLY-50THR
Structural gaps Exists
Uniprot ID P08980 ￫UniprotKB
S-S bonds 112:127
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain E  
auth_asym_id E
Residue indices (Uniprot) 1-31 (1-31)
Uniprot ID Q9M3L0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 1-36 (1-36)
Uniprot ID P80883 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 1-31 (1-37)
Uniprot ID P69461 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 1-29 (1-29)
Uniprot ID P61045 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain I heme  
auth_asym_id I
Residue indices (Uniprot) 2-215 (1-215)
Uniprot ID P00165 ￫UniprotKB
label_asym_ids of heme LA ,  KA ,  JA
Available structure PDB
Chain J heme  
auth_asym_id J
Residue indices (Uniprot) 2-160 (1-160)
Uniprot ID P00166 ￫UniprotKB
label_asym_ids of heme LA
Available structure PDB
Chain K heme  
auth_asym_id K
Residue indices (Uniprot) 1-285 (1-320)
Uniprot ID P16013 ￫UniprotKB
label_asym_ids of heme VA
Available structure PDB
Chain L  
auth_asym_id L
Residue indices (Uniprot) 8-178 (1-230)
Missing residues 46GLY-51GLY
Structural gaps Exists
Uniprot ID P08980 ￫UniprotKB
S-S bonds 112:127
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain M  
auth_asym_id M
Residue indices (Uniprot) 1-31 (1-31)
Uniprot ID Q9M3L0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id N
Residue indices (Uniprot) 1-36 (1-36)
Uniprot ID P80883 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id O
Residue indices (Uniprot) 1-31 (1-37)
Uniprot ID P69461 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id P
Residue indices (Uniprot) 1-29 (1-29)
Uniprot ID P61045 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB