PDB ID:  pdb_00008eum
  • MicroED structure of an Aeropyrum pernix protoglobin mutant
  • Experimental method: ELECTRON CRYSTALLOGRAPHY
  • Resolution: 2.1 Å
  • Deposition date: 2022-10-18
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (FEStructure of FEFE ), F (IMDStructure of IMDIMD ), G (IMDStructure of IMDIMD ), H (IMDStructure of IMDIMD ), I (IMDStructure of IMDIMD ), J (IMDStructure of IMDIMD ), K (FEStructure of FEFE ), M (IMDStructure of IMDIMD ), N (IMDStructure of IMDIMD ), O (FEStructure of FEFE ), P (IMDStructure of IMDIMD ), Q (IMDStructure of IMDIMD ), S (IMDStructure of IMDIMD ), T (IMDStructure of IMDIMD ), U (IMDStructure of IMDIMD ), V (IMDStructure of IMDIMD ), W (FEStructure of FEFE ), Y (IMDStructure of IMDIMD ), Z (IMDStructure of IMDIMD )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 6-195 (6-195)
Mutations (UniProt numbering)
Missing residues 161GLY-163SER
Structural gaps Exists
Uniprot ID Q9YFF4 →UniprotKB
label_asym_ids of heme E
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 6-195 (6-195)
Mutations (UniProt numbering)
Missing residues 161GLY-163SER
Structural gaps Exists
Uniprot ID Q9YFF4 →UniprotKB
label_asym_ids of heme L
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 6-195 (6-195)
Mutations (UniProt numbering)
Missing residues 161GLY-163SER
Structural gaps Exists
Uniprot ID Q9YFF4 →UniprotKB
label_asym_ids of heme R
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 6-195 (6-195)
Mutations (UniProt numbering)
Missing residues 62TRP-68HIS:161GLY-163SER
Structural gaps Exists
Uniprot ID Q9YFF4 →UniprotKB
label_asym_ids of heme X
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.15 Å