PDB ID:  pdb_00008sg5
  • Cytochrome P450 (CYP) 3A5 crystallized with clotrimazole
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • Deposition date: 2023-04-11
Number of assemblies:  8
Assembly ID:  1  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others J (CL6Structure of CL6CL6 ), K (CL6Structure of CL6CL6 ), L (CL6Structure of CL6CL6 ), M (CE9Structure of CE9CE9 )
Each chain information
Chain A heme  
auth_asym_id A
Residue indices (Uniprot) 23-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme I
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Assembly ID:  2  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others O (CL6Structure of CL6CL6 ), P (CL6Structure of CL6CL6 ), Q (CL6Structure of CL6CL6 ), R (CE9Structure of CE9CE9 )
Each chain information
Chain B heme  
auth_asym_id B
Residue indices (Uniprot) 23-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme N
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Assembly ID:  3  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others T (CL6Structure of CL6CL6 ), U (CL6Structure of CL6CL6 ), V (CL6Structure of CL6CL6 ), W (CE9Structure of CE9CE9 )
Each chain information
Chain C heme  
auth_asym_id C
Residue indices (Uniprot) 27-495 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme S
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Assembly ID:  4  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others AA (CL6Structure of CL6CL6 ), BA (CE9Structure of CE9CE9 ), Y (CL6Structure of CL6CL6 ), Z (CL6Structure of CL6CL6 )
Each chain information
Chain D heme  
auth_asym_id D
Residue indices (Uniprot) 26-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme X
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Assembly ID:  5  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others DA (CL6Structure of CL6CL6 ), EA (CL6Structure of CL6CL6 ), FA (CL6Structure of CL6CL6 ), GA (CE9Structure of CE9CE9 )
Each chain information
Chain E heme  
auth_asym_id E
Residue indices (Uniprot) 27-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme CA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å
Assembly ID:  6  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others IA (CL6Structure of CL6CL6 ), JA (CL6Structure of CL6CL6 ), KA (CL6Structure of CL6CL6 ), LA (CE9Structure of CE9CE9 )
Each chain information
Chain F heme  
auth_asym_id F
Residue indices (Uniprot) 27-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme HA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Assembly ID:  7  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others NA (CL6Structure of CL6CL6 ), OA (CL6Structure of CL6CL6 ), PA (CL6Structure of CL6CL6 ), QA (CE9Structure of CE9CE9 )
Each chain information
Chain G heme  
auth_asym_id G
Residue indices (Uniprot) 30-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme MA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Assembly ID:  8  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 1
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others SA (CL6Structure of CL6CL6 ), TA (CL6Structure of CL6CL6 ), UA (CL6Structure of CL6CL6 )
Each chain information
Chain H heme  
auth_asym_id H
Residue indices (Uniprot) 26-496 (24-497)
Mutations (UniProt numbering)
Missing residues 260ARG-269LEU:280ASN-287HIS:419PHE-425SER
Structural gaps Exists
Uniprot ID P20815 →UniprotKB
label_asym_ids of heme RA
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å