PDB ID:  pdb_00008vzv
  • Human TDO (hTDO) in complex with LM10
  • Experimental method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • Deposition date: 2024-02-12
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data modeled
Oligomeric count 4
label_asym_ids of protein
label_asym_ids of heme
label_asym_ids of the others F (ZIQStructure of ZIQZIQ ), G (A1AStructure of A1AA1A ), I (ZIQStructure of ZIQZIQ ), J (A1AStructure of A1AA1A ), L (ZIQStructure of ZIQZIQ ), N (ZIQStructure of ZIQZIQ ), O (A1AStructure of A1AA1A )
Each chain information
Chain A heme  
auth_asym_id AAA
Residue indices (Uniprot) 39-391 (18-389)
Mutations (UniProt numbering)
Missing residues 176ASN-178ARG:340ALA-345SER
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme E
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.13 Å
Chain B heme  
auth_asym_id BBB
Residue indices (Uniprot) 38-389 (18-389)
Mutations (UniProt numbering)
Missing residues 176ASN-179HIS:342THR-345SER
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme H
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain C heme  
auth_asym_id CCC
Residue indices (Uniprot) 39-391 (18-389)
Mutations (UniProt numbering)
Missing residues 175TYR-178ARG:238PHE-251GLU:338SER-346SER
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme K
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain D heme  
auth_asym_id DDD
Residue indices (Uniprot) 39-390 (18-389)
Mutations (UniProt numbering)
Missing residues 244LYS-245GLU:339LYS-345SER
Structural gaps Exists
Uniprot ID P48775 →UniprotKB
label_asym_ids of heme M
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.14 Å