PDB ID: pdb_00009qj3
- Structure of native leukocyte myeloperoxidase in complex with a truncated version of the Staphylococcal Peroxidase Inhibitor SPIN and iodide at pH 5.5
- Experimental method: X-RAY DIFFRACTION
- Resolution: 2.63 Å
- Deposition date: 2025-03-18
Number of assemblies: 1
| Structural data | modeled |
|---|---|
| Oligomeric count | 6 |
| label_asym_ids of protein | |
| label_asym_ids of heme | |
| label_asym_ids of the others |
AA (IOD  IOD
), AB (IODIOD
), AC (IODIOD
), AD (IODIOD
), BA (IODIOD
), BB (CA CA
), BC (IODIOD
), CA (IODIOD
), CC (IODIOD
), DA (IODIOD
), DB (IODIOD
), DC (IODIOD
), EA (IODIOD
), EB (IODIOD
), EC (IODIOD
), FA (IODIOD
), FB (IODIOD
), FC (IODIOD
), G (NAG NAG
), GA (IODIOD
), GB (IODIOD
), GC (IODIOD
), H (NAGNAG
), HA (IODIOD
), HB (IODIOD
), HC (IODIOD
), I (NAGNAG
, MAN MAN
, FUC FUC
), IA (IODIOD
), IB (IODIOD
), IC (IODIOD
), J (NAGNAG
), JA (IODIOD
), JB (IODIOD
), JC (IODIOD
), K (NAGNAG
), KA (IODIOD
), KB (IODIOD
), KC (CACA
), L (NAGNAG
, BMA BMA
, MANMAN
, FUCFUC
), LA (IODIOD
), LB (IODIOD
), M (IODIOD
), MA (IODIOD
), MB (IODIOD
), MC (IODIOD
), N (IODIOD
), NA (IODIOD
), NB (IODIOD
), NC (IODIOD
), O (IODIOD
), OA (IODIOD
), OB (IODIOD
), OC (IODIOD
), P (IODIOD
), PA (IODIOD
), PB (IODIOD
), PC (IODIOD
), Q (IODIOD
), QA (IODIOD
), QB (IODIOD
), QC (IODIOD
), R (IODIOD
), RA (IODIOD
), RB (IODIOD
), RC (IODIOD
), S (IODIOD
), SA (IODIOD
), SB (IODIOD
), SC (IODIOD
), T (IODIOD
), TA (IODIOD
), TB (IODIOD
), TC (IODIOD
), U (IODIOD
), UA (IODIOD
), UB (IODIOD
), UC (IODIOD
), V (IODIOD
), VA (IODIOD
), VB (IODIOD
), VC (IODIOD
), W (IODIOD
), WA (IODIOD
), WB (IODIOD
), WC (IODIOD
), X (IODIOD
), XA (IODIOD
), XB (IODIOD
), XC (IODIOD
), Y (IODIOD
), YA (IODIOD
), YB (IODIOD
), YC (IODIOD
), Z (IODIOD
), ZA (IODIOD
), ZB (IODIOD
), ZC (IODIOD
)
|
Each chain information
Showing all 6 chains (2 with heme). Show only chains with heme
| auth_asym_id | B |
|---|---|
| Residue indices (Uniprot) | 279-744 (279-745) |
| Missing residues | 316CYS-316CYS |
| Nonstandard amino acids |
 CSO
|
| Uniprot ID | P05164 ￫UniprotKB |
| S-S bonds | 281:291,285:309,387:398,606:663,704:730 |
| label_asym_ids of heme | LC |
| Available structure | PDB and Modeled |
| RMSD of experimental residues after energy minimization | 0.10 Å |
| auth_asym_id | D |
|---|---|
| Residue indices (Uniprot) | 279-743 (279-745) |
| Missing residues | 316CYS-316CYS |
| Nonstandard amino acids |
CSO
|
| Uniprot ID | P05164 ￫UniprotKB |
| S-S bonds | 281:291,285:309,387:398,606:663,704:730 |
| label_asym_ids of heme | CB |
| Available structure | PDB and Modeled |
| RMSD of experimental residues after energy minimization | 0.11 Å |
| auth_asym_id | A |
|---|---|
| Residue indices (Uniprot) | 167-271 (165-278) |
| Uniprot ID | P05164 ￫UniprotKB |
| S-S bonds | 167:180 |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | C |
|---|---|
| Residue indices (Uniprot) | 167-271 (165-278) |
| Uniprot ID | P05164 ￫UniprotKB |
| S-S bonds | 167:180 |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | E |
|---|---|
| Residue indices (Uniprot) | 43-99 (43-102) |
| Uniprot ID | Q2G0X2 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | F |
|---|---|
| Residue indices (Uniprot) | 43-100 (43-102) |
| Uniprot ID | Q2G0X2 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |