PDB ID: pdb_00009xk4
- In situ C2S2M2L4-type PSII-LHCII supercomplex, core, protomer 2
- Experimental method: ELECTRON MICROSCOPY
- Resolution: 2.78 Å
- Deposition date: 2025-11-05
Number of assemblies: 1
| Structural data | modeled |
|---|---|
| Oligomeric count | 21 |
| label_asym_ids of protein | |
| label_asym_ids of heme | |
| label_asym_ids of the others |
AA (CLA  CLA
), AB (BCR BCR
), AC (SQD SQD
), AD (BCRBCR
), BA (PHO PHO
), BB (BCRBCR
), BC (SQDSQD
), BD (LHG LHG
), CA (CLACLA
), CB (SQDSQD
), CC (DGD DGD
), CD (MGE MGE
), DA (BCRBCR
), DB (SQDSQD
), DC (DGDDGD
), DD (BCRBCR
), EA (SQDSQD
), EB (SQDSQD
), EC (DGDDGD
), ED (SQDSQD
), FA (SQDSQD
), FB (DGDDGD
), FC (LHGLHG
), FD (BCRBCR
), GA (SQDSQD
), GB (LHGLHG
), GC (LHGLHG
), GD (LHGLHG
), HA (PL9 PL9
), HB (LHGLHG
), HC (LNL LNL
), HD (SQDSQD
), IA (LHGLHG
), IB (LHGLHG
), IC (LHGLHG
), ID (LHGLHG
), JA (CLACLA
), JB (DGDDGD
), JC (LHGLHG
), JD (LHGLHG
), KA (CLACLA
), KB (LHGLHG
), KC (CLACLA
), KD (LHGLHG
), LA (CLACLA
), LB (CL CL
), LC (PHOPHO
), MA (CLACLA
), MB (CLACLA
), MC (SQDSQD
), NA (CLACLA
), NB (CLACLA
), NC (CLACLA
), OA (CLACLA
), OB (CLACLA
), OC (CLACLA
), PA (CLACLA
), PB (CLACLA
), PC (BCT BCT
), QA (CLACLA
), QB (CLACLA
), QC (BCRBCR
), RA (CLACLA
), RB (CLACLA
), RC (PL9PL9
), SA (CLACLA
), SB (CLACLA
), SC (SQDSQD
), TA (CLACLA
), TB (CLACLA
), TC (PL9PL9
), UA (CLACLA
), UB (CLACLA
), UC (LHGLHG
), V (LHGLHG
), VA (CLACLA
), VB (CLACLA
), W (OEX OEX
), WA (CLACLA
), WB (CLACLA
), WC (PL9PL9
), X (FE2 FE2
), XA (CLACLA
), XB (CLACLA
), XC (BCRBCR
), Y (CLCL
), YA (CLACLA
), YB (CLACLA
), YC (BCRBCR
), Z (CLACLA
), ZA (BCRBCR
), ZB (BCRBCR
), ZC (SQDSQD
)
|
Each chain information
Showing all 21 chains (2 with heme). Show only chains with heme
| auth_asym_id | 1a |
|---|---|
| Residue indices (Uniprot) | 11-343 (11-343) |
| Uniprot ID | P0C434 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1b |
|---|---|
| Residue indices (Uniprot) | 2-504 (2-504) |
| Uniprot ID | P0C362 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1c |
|---|---|
| Residue indices (Uniprot) | 24-473 (24-473) |
| Uniprot ID | P0C365 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1d |
|---|---|
| Residue indices (Uniprot) | 13-353 (13-353) |
| Uniprot ID | P0C435 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1e |
|---|---|
| Residue indices (Uniprot) | 8-82 (8-82) |
| Uniprot ID | P0C368 ￫UniprotKB |
| label_asym_ids of heme | VC |
| Available structure | PDB |
| auth_asym_id | 1f |
|---|---|
| Residue indices (Uniprot) | 10-39 (9-39) |
| Uniprot ID | P0C401 ￫UniprotKB |
| label_asym_ids of heme | VC |
| Available structure | PDB |
| auth_asym_id | 1h |
|---|---|
| Residue indices (Uniprot) | 13-72 (13-72) |
| Uniprot ID | P0C420 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1i |
|---|---|
| Residue indices (Uniprot) | 1-34 (1-34) |
| Uniprot ID | P0C405 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1j |
|---|---|
| Residue indices (Uniprot) | 6-40 (6-40) |
| Uniprot ID | P0C414 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1k |
|---|---|
| Residue indices (Uniprot) | 25-61 (25-61) |
| Uniprot ID | P0C408 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1l |
|---|---|
| Residue indices (Uniprot) | 4-38 (2-38) |
| Uniprot ID | P0C416 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1m |
|---|---|
| Residue indices (Uniprot) | 1-33 (1-34) |
| Uniprot ID | P0C411 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1o |
|---|---|
| Residue indices (Uniprot) | 1-247 (87-333) |
| Missing residues | 63GLU-72GLU |
| Structural gaps | Exists |
| Uniprot ID | Q943W1 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB and Modeled |
| RMSD of experimental residues after energy minimization | 0.13 Å |
| auth_asym_id | 1p |
|---|---|
| Residue indices (Uniprot) | 1-186 (69-254) |
| Uniprot ID | Q8GTK4 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1t |
|---|---|
| Residue indices (Uniprot) | 1-31 (1-32) |
| Uniprot ID | P0C427 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1u |
|---|---|
| Residue indices (Uniprot) | 107-133 (93-119) |
| Uniprot ID | Q0E032 ￫UniprotKB |
| S-S bonds | 122:131 |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1v |
|---|---|
| Residue indices (Uniprot) | 13-111 (33-137) |
| Uniprot ID | Q8H4P7 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1w |
|---|---|
| Residue indices (Uniprot) | 1-44 (70-113) |
| Uniprot ID | Q5ZBY9 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1x |
|---|---|
| Residue indices (Uniprot) | 46-83 (78-116) |
| Uniprot ID | Q7EXX2 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1y |
|---|---|
| Residue indices (Uniprot) | 3-36 (92-127) |
| Uniprot ID | Q6ZJ41 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |
| auth_asym_id | 1z |
|---|---|
| Residue indices (Uniprot) | 1-62 (1-62) |
| Uniprot ID | P0C429 ￫UniprotKB |
| label_asym_ids of heme | None |
| Available structure | PDB |