PDB ID:  pdb_000021wv
  • In situ structure of the C2S2M2L4-type PSII-LHCII supercomplex from Oryza sativa
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: 2.89 Å
  • Deposition date: 2026-01-01
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data modeled
Oligomeric count 72
label_asym_ids of protein
72 chains (4 with heme) A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, IB, J, JA, JB, K, KA, KB, L, LA, LB, M, MA, MB, N, NA, NB, O, OA, OB, P, PA, PB, Q, QA, QB, R, RA, RB, S, SA, SB, T, TA, TB, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA
label_asym_ids of heme IR VK
label_asym_ids of the others
show AC (CHL), AD (CLA), AE (CLA), AF (CHL), AG (CHL), AH (CHL), AI (DGD), AJ (DGD), AK (LHG), AL (CLA), AM (CHL), AN (CLA), AO (LUT), AP (CLA), AQ (CL), AR (CLA), AS (LHG), AT (LHG), AU (CHL), BC (CHL), BD (CLA), BE (CLA), BF (CHL), BG (CLA), BH (CHL), BI (CLA), BJ (DGD), BK (LHG), BL (CHL), BM (CLA), BN (CLA), BO (LUT), BP (CLA), BQ (CLA), BR (CLA), BS (XAT), BT (PL9), BU (CHL), CC (CLA), CD (LUT), CE (CLA), CF (CLA), CG (CLA), CH (CHL), CI (CLA), CJ (SQD), CK (MGE), CL (CHL), CM (CLA), CN (CLA), CO (LHG), CP (CLA), CQ (CLA), CR (BCT), CS (BCR), CT (CLA), CU (CLA), DC (CLA), DD (LUT), DE (CHL), DF (CLA), DG (CLA), DH (CLA), DI (CLA), DJ (SQD), DK (LHG), DL (CHL), DM (CLA), DN (CLA), DO (DGD), DP (CLA), DQ (CLA), DR (BCR), DS (BCR), DT (CLA), DU (CLA), EC (CLA), ED (LHG), EE (CLA), EF (CLA), EG (CLA), EH (CLA), EI (CLA), EJ (BCR), EK (LHG), EL (CHL), EM (CHL), EN (CHL), EO (LHG), EP (CLA), EQ (CLA), ER (PL9), ES (BCR), ET (CLA), EU (CLA), FC (CLA), FD (CHL), FE (LUT), FF (CLA), FG (CHL), FH (CLA), FI (CLA), FJ (CLA), FK (LHG), FL (CHL), FM (CHL), FN (CLA), FO (LHG), FP (CLA), FQ (CLA), FR (SQD), FS (LHG), FT (CHL), FU (CLA), GC (LUT), GD (CLA), GE (LHG), GF (CLA), GG (CLA), GH (CLA), GI (CLA), GJ (CLA), GK (CLA), GL (CLA), GM (CHL), GN (LUT), GO (LHG), GP (CLA), GQ (CLA), GR (PL9), GS (MGE), GT (CHL), GU (CLA), HC (LUT), HD (CHL), HE (CHL), HF (CHL), HG (LUT), HH (LUT), HI (CLA), HJ (CLA), HK (CLA), HL (CLA), HM (CHL), HN (XAT), HO (3PH), HP (CLA), HQ (CLA), HR (LHG), HS (BCR), HT (CHL), HU (CLA), IC (VIV), ID (CHL), IE (CHL), IF (LUT), IG (LHG), IH (LUT), II (CLA), IJ (CLA), IK (BCT), IL (CLA), IM (CHL), IN (LHG), IO (BCR), IP (CLA), IQ (CLA), IS (SQD), IT (CLA), IU (LUT), JC (LHG), JD (CHL), JE (CHL), JF (CHL), JG (CHL), JH (VIV), JI (CLA), JJ (CLA), JK (CLA), JL (CLA), JM (CLA), JN (LHG), JO (BCR), JP (CLA), JQ (CLA), JR (CHL), JS (SQD), JT (CLA), JU (LUT), KC (LHG), KD (CHL), KE (CHL), KF (CHL), KG (CHL), KH (LHG), KI (CLA), KJ (CLA), KK (CLA), KL (CLA), KM (CLA), KN (LHG), KO (LHG), KP (CLA), KQ (CLA), KR (CLA), KS (CHL), KT (CLA), KU (LHG), LC (CLA), LD (CHL), LE (CHL), LF (CLA), LG (CHL), LH (CLA), LI (CLA), LJ (CLA), LK (BCR), LL (LUT), LM (CLA), LN (SQD), LO (OEX), LP (CLA), LQ (CLA), LR (CLA), LS (CLA), LT (CLA), LU (MGE), MC (LHG), MD (CLA), ME (CLA), MF (CHL), MG (CHL), MH (LHG), MI (CLA), MJ (CLA), MK (PL9), ML (LUT), MM (CLA), MN (LHG), MO (FE2), MP (CLA), MQ (CLA), MR (CLA), MS (CLA), MT (CLA), MU (LHG), NC (DGD), ND (CLA), NE (CLA), NF (CHL), NG (CHL), NH (FE2), NI (CLA), NJ (CLA), NK (LHG), NL (XAT), NM (CLA), NN (CHL), NO (CL), NP (CLA), NQ (CLA), NR (CHL), NS (CLA), NT (CHL), NU (LHG), OC (LHG), OD (CLA), OE (CLA), OF (CHL), OG (CLA), OH (CL), OI (CLA), OJ (CLA), OK (LHG), OL (LHG), OM (LUT), ON (CLA), OO (CLA), OP (BCR), OQ (BCR), OR (CHL), OS (CHL), OT (CLA), OU (SQD), PC (CLA), PD (CLA), PE (CLA), PF (CHL), PG (CLA), PH (CL), PI (CLA), PJ (CLA), PK (LHG), PL (XAT), PM (LHG), PN (CLA), PO (CLA), PP (BCR), PQ (SQD), PR (CHL), PS (CHL), PT (LUT), PU (LHG), QC (CHL), QD (CLA), QE (CLA), QF (CLA), QG (CLA), QH (CLA), QI (CLA), QJ (CLA), QK (SQD), QL (BCR), QM (LHG), QN (CHL), QO (PHO), QP (BCR), QQ (DGD), QR (CHL), QS (CHL), QT (XAT), QU (LHG), RC (CHL), RD (CLA), RE (CLA), RF (CLA), RG (CLA), RH (PHO), RI (BCR), RJ (CLA), RK (SQD), RL (LHG), RM (LHG), RN (CHL), RO (CLA), RP (SQD), RQ (DGD), RR (CHL), RS (CHL), RT (LHG), RU (LHG), SC (CHL), SD (CLA), SE (CLA), SF (CLA), SG (CLA), SH (PHO), SI (BCR), SJ (LNL), SK (LHG), SL (BCR), SM (PL9), SN (CHL), SO (BCR), SP (SQD), SQ (DGD), SR (CLA), SS (CHL), ST (SQD), TC (CHL), TD (CLA), TE (BCR), TF (CLA), TG (CLA), TH (CLA), TI (BCR), TJ (LNL), TK (LHG), TL (LHG), TM (CLA), TN (CLA), TO (SQD), TP (LHG), TQ (LHG), TR (CLA), TS (CLA), TT (LHG), UB (CLA), UC (CHL), UD (CHL), UE (CLA), UF (CLA), UG (CLA), UH (OEX), UI (SQD), UJ (DGD), UK (PL9), UL (BCR), UM (CHL), UN (CLA), UO (SQD), UP (LHG), UQ (LHG), UR (CLA), US (CLA), UT (LHG), VB (CLA), VC (CLA), VD (CHL), VE (CLA), VF (CLA), VG (CLA), VH (BCR), VI (LHG), VJ (DGD), VL (LHG), VM (CHL), VN (CLA), VO (PL9), VP (LHG), VQ (LHG), VR (CLA), VS (CLA), VT (CHL), WB (CLA), WC (CLA), WD (CHL), WE (CLA), WF (CLA), WG (CLA), WH (PL9), WI (SQD), WJ (DGD), WK (LHG), WL (LHG), WM (CHL), WN (CLA), WO (LHG), WP (LHG), WQ (LHG), WR (CLA), WS (CLA), WT (CLA), XB (CHL), XC (CLA), XD (CHL), XE (CLA), XF (CHL), XG (CLA), XH (SQD), XI (MGE), XJ (LHG), XK (CHL), XL (LHG), XM (CLA), XN (CLA), XO (BCR), XP (DGD), XQ (CLA), XR (LUT), XS (CLA), XT (CLA), YB (CHL), YC (CLA), YD (CLA), YE (CHL), YF (CHL), YG (CHL), YH (SQD), YI (MGE), YJ (LHG), YK (CLA), YL (SQD), YM (CLA), YN (CLA), YO (CLA), YP (LHG), YQ (PHO), YR (LUT), YS (LUT), YT (CLA), ZB (CHL), ZC (CLA), ZD (CLA), ZE (CHL), ZF (CHL), ZG (CHL), ZH (SQD), ZI (DGD), ZJ (SQD), ZK (CLA), ZL (LHG), ZM (CLA), ZN (CLA), ZO (CLA), ZP (LNL), ZQ (SQD), ZR (XAT), ZS (LHG), ZT (CHL)
Each chain information

Showing 4 chains with heme of 72. Show all chains

Chain WA heme  
auth_asym_id 1e
Residue indices (Uniprot) 8-82 (8-82)
Uniprot ID P0C368 →UniprotKB
label_asym_ids of heme IR
Available structure PDB
Chain X heme  
auth_asym_id 1E
Residue indices (Uniprot) 8-82 (8-82)
Uniprot ID P0C368 →UniprotKB
label_asym_ids of heme VK
Available structure PDB
Chain XA heme  
auth_asym_id 1f
Residue indices (Uniprot) 10-39 (5-39)
Uniprot ID P0C401 →UniprotKB
label_asym_ids of heme IR
Available structure PDB
Chain Y heme  
auth_asym_id 1F
Residue indices (Uniprot) 5-39 (5-39)
Uniprot ID P0C401 →UniprotKB
label_asym_ids of heme VK
Available structure PDB