Danish
PDB ID:  pdb_00008ibd
  • Respiratory complex CI:CIII2, type II, Wild type mouse under cold temperature
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2023-02-10
Number of assemblies:  1
Assembly ID:  0  (author_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 67
label_asym_ids of protein
67 chains (4 with heme) A, AA, AB, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, IB, J, JA, JB, K, KA, KB, L, LA, LB, M, MA, MB, N, NA, NB, O, OA, OB, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, YA, Z, ZA
label_asym_ids of heme CD DD FD HD ID MD
label_asym_ids of the others
show AC (UQ9), AD (3PE), BC (3PE), BD (EHZ), CC (3PE), DC (SF4), EC (SF4), ED (UQ6), FC (3PE), GC (3PE), GD (3PE), HC (3PE), IC (3PE), JC (CDL), JD (3PE), KC (3PE), KD (U10), LC (3PE), LD (UQ6), MC (3PE), NC (3PE), ND (3PH), OC (ADP), OD (CDL), PB (3PE), PC (NDP), PD (CDL), QB (SF4), QC (ZN), QD (3PE), RB (UQ1), RC (EHZ), SB (PC1), SC (CDL), TB (PC1), TC (3PE), UB (FES), UC (CDL), VB (FMN), VC (3PE), WB (SF4), WC (CDL), XB (SF4), XC (3PE), YB (SF4), YC (3PE), ZB (FES), ZC (3PE)
Each chain information

Showing all 67 chains (4 with heme). Show only chains with heme

Chain A  
auth_asym_id A
Residue indices (Uniprot) 1-113 (1-115)
Missing residues 27MET-29LEU:37TYR-48ARG
Structural gaps Exists
Uniprot ID P03899 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.21 Å
Chain AA  
auth_asym_id a
Residue indices (Uniprot) 1-67 (1-70)
Uniprot ID O35683 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain AB  
auth_asym_id AH
Residue indices (Uniprot) 25-88 (1-89)
Uniprot ID P99028 ￫UniprotKB
S-S bonds 51:65
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id B
Residue indices (Uniprot) 70-224 (1-224)
Uniprot ID Q9DC70 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id b
Residue indices (Uniprot) 5-84 (1-84)
Uniprot ID Q9CQ91 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BB  
auth_asym_id AI
Residue indices (Uniprot) 41-78 (1-274)
Missing residues 47ARG-56SER
Structural gaps Exists
Uniprot ID Q9CR68 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.45 Å
Chain C  
auth_asym_id C
Residue indices (Uniprot) 45-242 (1-263)
Uniprot ID Q9DCT2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id c
Residue indices (Uniprot) 29-75 (1-76)
Uniprot ID Q9CQY9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CB  
auth_asym_id AJ
Residue indices (Uniprot) 17-37 (1-64)
Uniprot ID Q8R1I1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain D  
auth_asym_id D
Residue indices (Uniprot) 33-463 (1-463)
Missing residues 75LYS-78THR
Structural gaps Exists
Uniprot ID Q91WD5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.17 Å
Chain DA  
auth_asym_id d
Residue indices (Uniprot) 1-120 (1-120)
Uniprot ID Q9CQ54 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DB  
auth_asym_id AK
Residue indices (Uniprot) 21-37 (1-56)
Uniprot ID Q9CPX8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain E  
auth_asym_id E
Residue indices (Uniprot) 38-247 (1-248)
Uniprot ID Q9D6J6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id e
Residue indices (Uniprot) 2-106 (1-106)
Uniprot ID Q99LY9 ￫UniprotKB
S-S bonds 33:66,43:56
label_asym_ids of heme None
Available structure PDB
Chain EB  
auth_asym_id Aa
Residue indices (Uniprot) 44-478 (1-480)
Structural gaps Exists
Uniprot ID Q9CZ13 ￫UniprotKB
S-S bonds 338:360
label_asym_ids of heme None
Available structure PDB
Chain F  
auth_asym_id F
Residue indices (Uniprot) 32-457 (1-464)
Uniprot ID Q91YT0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id f
Residue indices (Uniprot) 7-57 (1-57)
Uniprot ID P0DN34 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FB  
auth_asym_id Ab
Residue indices (Uniprot) 36-453 (1-453)
Uniprot ID Q9DB77 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id G
Residue indices (Uniprot) 29-715 (1-727)
Uniprot ID Q91VD9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id g
Residue indices (Uniprot) 50-151 (1-151)
Uniprot ID O09111 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GB heme  
auth_asym_id Ac
Residue indices (Uniprot) 8-380 (1-381)
Uniprot ID P00158 ￫UniprotKB
label_asym_ids of heme ID ,  HD
Available structure PDB
Chain H  
auth_asym_id H
Residue indices (Uniprot) 1-318 (1-318)
Missing residues 209SER-209SER
Structural gaps Exists
Uniprot ID P03888 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.17 Å
Chain HA  
auth_asym_id h
Residue indices (Uniprot) 52-189 (1-189)
Uniprot ID Q9CQH3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HB heme  
auth_asym_id Ad
Residue indices (Uniprot) 86-324 (1-325)
Uniprot ID Q9D0M3 ￫UniprotKB
label_asym_ids of heme MD
Available structure PDB
Chain I  
auth_asym_id I
Residue indices (Uniprot) 35-212 (1-212)
Missing residues 42LYS-47GLU
Structural gaps Exists
Uniprot ID Q8K3J1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain IA  
auth_asym_id i
Residue indices (Uniprot) 2-128 (1-128)
Structural gaps Exists
Uniprot ID Q3UIU2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IB  
auth_asym_id Ae
Residue indices (Uniprot) 79-274 (1-274)
Missing residues 95GLU-102SER
Structural gaps Exists
Uniprot ID Q9CR68 ￫UniprotKB
S-S bonds 222:238
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.18 Å
Chain J  
auth_asym_id J
Residue indices (Uniprot) 1-171 (1-172)
Mutations (UniProt numbering) N116L, L117G
Missing residues 80GLU-82TRP:111GLU-115ILE
Structural gaps Exists
Uniprot ID P03925 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.16 Å
Chain JA  
auth_asym_id j
Residue indices (Uniprot) 39-103 (1-105)
Uniprot ID Q9CPU2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JB  
auth_asym_id Af
Residue indices (Uniprot) 14-111 (1-111)
Uniprot ID Q9CQB4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id K
Residue indices (Uniprot) 1-97 (1-98)
Uniprot ID P03903 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id k
Residue indices (Uniprot) 18-90 (1-104)
Uniprot ID Q9CQZ6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KB  
auth_asym_id Ag
Residue indices (Uniprot) 4-77 (1-82)
Uniprot ID Q9CQ69 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id L
Residue indices (Uniprot) 1-606 (1-607)
Uniprot ID P03921 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id l
Residue indices (Uniprot) 31-186 (1-186)
Uniprot ID Q9D6J5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LB  
auth_asym_id Ah
Residue indices (Uniprot) 24-89 (1-89)
Missing residues 57SER-60GLN
Structural gaps Exists
Uniprot ID P99028 ￫UniprotKB
S-S bonds 35:79,51:65
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.22 Å
Chain M  
auth_asym_id M
Residue indices (Uniprot) 1-459 (1-459)
Uniprot ID P03911 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id m
Residue indices (Uniprot) 4-129 (1-129)
Uniprot ID Q9CQC7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MB  
auth_asym_id Ai
Residue indices (Uniprot) 42-78 (1-274)
Missing residues 48PRO-56SER
Structural gaps Exists
Uniprot ID Q9CR68 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.23 Å
Chain N  
auth_asym_id N
Residue indices (Uniprot) 1-344 (1-345)
Uniprot ID P03893 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id n
Residue indices (Uniprot) 2-179 (1-179)
Uniprot ID Q9CQJ8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NB  
auth_asym_id Aj
Residue indices (Uniprot) 8-50 (1-64)
Uniprot ID Q8R1I1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O  
auth_asym_id O
Residue indices (Uniprot) 37-355 (1-355)
Uniprot ID Q99LC3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain OA  
auth_asym_id o
Residue indices (Uniprot) 1-123 (1-137)
Uniprot ID Q9CR61 ￫UniprotKB
S-S bonds 59:90
label_asym_ids of heme None
Available structure PDB
Chain OB  
auth_asym_id Ak
Residue indices (Uniprot) 2-39 (1-56)
Uniprot ID Q9CPX8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain P  
auth_asym_id P
Residue indices (Uniprot) 39-377 (1-377)
Uniprot ID Q9DC69 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain PA  
auth_asym_id p
Residue indices (Uniprot) 3-174 (1-176)
Uniprot ID Q9DCS9 ￫UniprotKB
S-S bonds 77:84,113:125
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id Q
Residue indices (Uniprot) 51-166 (1-175)
Uniprot ID Q9CXZ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain QA  
auth_asym_id q
Residue indices (Uniprot) 2-144 (1-145)
Structural gaps Exists
Uniprot ID Q7TMF3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id R
Residue indices (Uniprot) 31-113 (1-116)
Uniprot ID P52503 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain RA  
auth_asym_id r
Residue indices (Uniprot) 3-113 (1-113)
Structural gaps Exists
Uniprot ID Q9Z1P6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id S
Residue indices (Uniprot) 14-96 (1-99)
Uniprot ID Q9CQ75 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain SA  
auth_asym_id s
Residue indices (Uniprot) 75-97 (1-104)
Uniprot ID Q8BK30 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id T
Residue indices (Uniprot) 76-150 (1-156)
Uniprot ID Q9CR21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain TA  
auth_asym_id AA
Residue indices (Uniprot) 45-476 (1-480)
Structural gaps Exists
Uniprot ID Q9CZ13 ￫UniprotKB
S-S bonds 338:360
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id U
Residue indices (Uniprot) 68-156 (1-156)
Uniprot ID Q9CR21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain UA  
auth_asym_id AB
Residue indices (Uniprot) 36-453 (1-453)
Uniprot ID Q9DB77 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id V
Residue indices (Uniprot) 5-116 (1-116)
Uniprot ID Q9CPP6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain VA heme  
auth_asym_id AC
Residue indices (Uniprot) 8-380 (1-381)
Uniprot ID P00158 ￫UniprotKB
label_asym_ids of heme DD ,  CD
Available structure PDB
Chain W  
auth_asym_id W
Residue indices (Uniprot) 18-131 (1-131)
Uniprot ID Q9CQZ5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain WA heme  
auth_asym_id AD
Residue indices (Uniprot) 89-324 (1-325)
Uniprot ID Q9D0M3 ￫UniprotKB
label_asym_ids of heme FD
Available structure PDB
Chain X  
auth_asym_id X
Residue indices (Uniprot) 4-172 (1-172)
Uniprot ID Q9DCJ5 ￫UniprotKB
S-S bonds 36:66,46:56,78:110,88:100
label_asym_ids of heme None
Available structure PDB
Chain XA  
auth_asym_id AE
Residue indices (Uniprot) 79-256 (1-274)
Structural gaps Exists
Uniprot ID Q9CR68 ￫UniprotKB
S-S bonds 222:238
label_asym_ids of heme None
Available structure PDB
Chain Y  
auth_asym_id Y
Residue indices (Uniprot) 5-143 (1-143)
Uniprot ID G5E814 ￫UniprotKB
S-S bonds 20:77
label_asym_ids of heme None
Available structure PDB
Chain YA  
auth_asym_id AF
Residue indices (Uniprot) 14-110 (1-111)
Uniprot ID Q9CQB4 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Z  
auth_asym_id Z
Residue indices (Uniprot) 7-144 (1-144)
Uniprot ID Q9ERS2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain ZA  
auth_asym_id AG
Residue indices (Uniprot) 4-79 (1-82)
Uniprot ID Q9CQ69 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB