Danish
PDB ID:  pdb_00008pw7
  • A respirasome from murine liver
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2023-07-19
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 79
label_asym_ids of protein
79 chains (5 with heme) A, AA, AB, AC, B, BA, BB, C, CA, CB, D, DA, DB, E, EA, EB, F, FA, FB, G, GA, GB, H, HA, HB, I, IA, IB, J, JA, JB, K, KA, KB, L, LA, LB, M, MA, MB, N, NA, NB, O, OA, OB, P, PA, PB, Q, QA, QB, R, RA, RB, S, SA, SB, T, TA, TB, U, UA, UB, V, VA, VB, W, WA, WB, X, XA, XB, Y, YA, YB, Z, ZA, ZB
label_asym_ids of heme DC EC HD ID ND SC TC XC
label_asym_ids of the others
show AD (CDL), AE (SF4), AF (DGT), BC (CU), BD (3PE), BE (SF4), BF (MG), CC (NA), CD (PC1), CE (SF4), CF (PC1), DD (PC1), DE (FES), DF (CDL), ED (3PE), EE (K), EF (3PE), FC (3PE), FD (PC1), FE (SF4), FF (3PE), GC (3PE), GD (3PE), GE (SF4), GF (CDL), HC (3PE), HE (PC1), HF (CDL), IC (MG), IE (PC1), IF (3PE), JC (3PE), JD (3PE), JE (NDP), JF (3PE), KC (CUA), KD (CDL), KE (PC1), KF (CDL), LC (3PE), LD (CDL), LE (ZN), LF (3PE), MC (ZN), MD (3PE), ME (ZMP), MF (ZMP), NC (3PE), NE (3PE), OC (3PE), OD (FES), OE (3PE), PC (TGL), PD (CDL), PE (3PE), QC (3PE), QD (CDL), QE (CDL), RC (CDL), RD (CDL), RE (3PE), SD (3PE), SE (3PE), TD (PC1), TE (CDL), UC (3PE), UD (SF4), UE (CDL), VC (CDL), VD (3PE), VE (3PE), WC (3PE), WD (PC1), WE (3PE), XD (3PE), XE (3PE), YC (FES), YD (FES), YE (CDL), ZC (3PE), ZD (FMN), ZE (3PE)
Each chain information

Showing all 79 chains (5 with heme). Show only chains with heme

Chain A heme  
auth_asym_id n
Residue indices (Uniprot) 1-514 (1-514)
Uniprot ID P00397 ￫UniprotKB
label_asym_ids of heme DC ,  EC
Available structure PDB
Chain AA  
auth_asym_id P
Residue indices (Uniprot) 1-196 (1-274)
Uniprot ID Q9CR68 ￫UniprotKB
S-S bonds 144:160
label_asym_ids of heme None
Available structure PDB
Chain AB  
auth_asym_id J1
Residue indices (Uniprot) 1-172 (1-172)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03925 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain AC  
auth_asym_id z
Residue indices (Uniprot) 1-44 (5-66)
Mutations (UniProt numbering) P2S, R3V, P6L, I7L, L10S, Q12T, A13G, P14S, K16R, F17R, T18L, V19M, K22R, H24Q, S26H, A27S, K31R, T32E, P33Q, T34L, S35G, A36V, V37L, E38D, Q39I, A40T, V41I, I43L, S44T, A45S, I46C, V47F, G49C, F50C, M51L, V52L, A59S, A69R, A70E
Uniprot ID P48772 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain B  
auth_asym_id o
Residue indices (Uniprot) 1-227 (1-227)
Uniprot ID P00405 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BA  
auth_asym_id Q
Residue indices (Uniprot) 9-110 (1-111)
Mutations (UniProt numbering) L61F
Uniprot ID Q9D855 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain BB  
auth_asym_id K1
Residue indices (Uniprot) 1-98 (1-98)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03903 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain C  
auth_asym_id p
Residue indices (Uniprot) 2-261 (1-261)
Uniprot ID P00416 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CA  
auth_asym_id R
Residue indices (Uniprot) 2-78 (1-82)
Uniprot ID Q9CQ69 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain CB  
auth_asym_id L1
Residue indices (Uniprot) 1-606 (1-607)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03921 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Chain D  
auth_asym_id q
Residue indices (Uniprot) 8-146 (1-169)
Uniprot ID P19783 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain DA  
auth_asym_id S
Residue indices (Uniprot) 9-76 (1-89)
Uniprot ID P99028 ￫UniprotKB
S-S bonds 22:66,38:52
label_asym_ids of heme None
Available structure PDB
Chain DB  
auth_asym_id M1
Residue indices (Uniprot) 1-459 (1-459)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03911 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.09 Å
Chain E  
auth_asym_id r
Residue indices (Uniprot) 6-109 (1-146)
Uniprot ID P12787 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EA  
auth_asym_id U
Residue indices (Uniprot) 2-61 (1-64)
Uniprot ID Q8R1I1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain EB  
auth_asym_id N1
Residue indices (Uniprot) 1-345 (1-345)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03893 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain F  
auth_asym_id s
Residue indices (Uniprot) 4-97 (1-128)
Uniprot ID P19536 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FA  
auth_asym_id V
Residue indices (Uniprot) 1-53 (1-56)
Uniprot ID Q9CPX8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain FB  
auth_asym_id O1
Residue indices (Uniprot) 1-320 (1-355)
Uniprot ID Q99LC3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain G  
auth_asym_id t
Residue indices (Uniprot) 8-83 (54-95)
Mutations (UniProt numbering) L3R, P4A, K6P, V7G, S9R, S11P, A13S, A15G, K17H, D19E, H20E, G24S, N26R, T27M, R29K, L30A, F33Y, V34F, L35V, A41G, L42V, C43S, S44M, C47V, W48F, M49L, H50K, A51S, G52R, E58P, I60V, P61A, H63P, A73P, H96D, P97E
Uniprot ID P43023 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GA  
auth_asym_id T
Residue indices (Uniprot) 1-78 (1-274)
Uniprot ID Q9CR68 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain GB  
auth_asym_id U1
Residue indices (Uniprot) 1-88 (1-156)
Uniprot ID Q9CR21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain H  
auth_asym_id u
Residue indices (Uniprot) 7-85 (1-86)
Uniprot ID P56391 ￫UniprotKB
S-S bonds 29:64,39:53
label_asym_ids of heme None
Available structure PDB
Chain HA  
auth_asym_id 6
Residue indices (Uniprot) 33-189 (1-224)
Uniprot ID Q9DC70 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain HB  
auth_asym_id X1
Residue indices (Uniprot) 1-171 (1-172)
Uniprot ID Q9DCJ5 ￫UniprotKB
S-S bonds 45:55
label_asym_ids of heme None
Available structure PDB
Chain I  
auth_asym_id v
Residue indices (Uniprot) 5-75 (1-76)
Uniprot ID Q9CPQ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IA  
auth_asym_id C1
Residue indices (Uniprot) 7-214 (1-263)
Uniprot ID Q9DCT2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain IB  
auth_asym_id Y1
Residue indices (Uniprot) 1-140 (1-141)
Mutations (UniProt numbering) R40S
Uniprot ID Q9D8B4 ￫UniprotKB
S-S bonds 17:74,94:114
label_asym_ids of heme None
Available structure PDB
Chain J  
auth_asym_id x
Residue indices (Uniprot) 6-54 (1-80)
Uniprot ID P56393 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain JA  
auth_asym_id D1
Residue indices (Uniprot) 1-430 (1-463)
Missing residues 85ARG-85ARG
Nonstandard amino acids 2MR Structure of 2MR2MR
Uniprot ID Q91WD5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain JB  
auth_asym_id Z1
Residue indices (Uniprot) 3-143 (1-144)
Uniprot ID Q9ERS2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain K  
auth_asym_id y
Residue indices (Uniprot) 1-47 (1-63)
Uniprot ID P17665 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KA  
auth_asym_id 2
Residue indices (Uniprot) 4-217 (1-248)
Uniprot ID Q9D6J6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain KB  
auth_asym_id a1
Residue indices (Uniprot) 1-70 (1-70)
Uniprot ID O35683 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain L  
auth_asym_id w
Residue indices (Uniprot) 1-57 (1-83)
Uniprot ID P48771 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LA  
auth_asym_id 1
Residue indices (Uniprot) 9-438 (1-464)
Uniprot ID Q91YT0 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain LB  
auth_asym_id b1
Residue indices (Uniprot) 1-83 (1-84)
Missing residues 0MET-1ALA
Nonstandard amino acids AYA Structure of AYAAYA
Uniprot ID Q9CQ91 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain M  
auth_asym_id A
Residue indices (Uniprot) 2-446 (1-480)
Uniprot ID Q9CZ13 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MA  
auth_asym_id 3
Residue indices (Uniprot) 5-694 (1-727)
Uniprot ID Q91VD9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain MB  
auth_asym_id c1
Residue indices (Uniprot) 1-48 (1-76)
Uniprot ID Q9CQY9 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain N  
auth_asym_id B
Residue indices (Uniprot) 20-439 (1-453)
Uniprot ID Q9DB77 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NA  
auth_asym_id 9
Residue indices (Uniprot) 1-178 (1-212)
Uniprot ID Q8K3J1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain NB  
auth_asym_id d1
Residue indices (Uniprot) 1-120 (1-120)
Uniprot ID Q9CQ54 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain O heme  
auth_asym_id C
Residue indices (Uniprot) 1-380 (1-381)
Uniprot ID P00158 ￫UniprotKB
label_asym_ids of heme SC ,  TC
Available structure PDB
Chain OA  
auth_asym_id P1
Residue indices (Uniprot) 1-342 (1-377)
Uniprot ID Q9DC69 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain OB  
auth_asym_id e1
Residue indices (Uniprot) 1-105 (1-106)
Uniprot ID Q99LY9 ￫UniprotKB
S-S bonds 32:65,42:55
label_asym_ids of heme None
Available structure PDB
Chain P heme  
auth_asym_id D
Residue indices (Uniprot) 1-240 (1-325)
Uniprot ID Q9D0M3 ￫UniprotKB
label_asym_ids of heme XC
Available structure PDB
Chain PA  
auth_asym_id Q1
Residue indices (Uniprot) 8-133 (1-175)
Uniprot ID Q9CXZ1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain PB  
auth_asym_id f1
Residue indices (Uniprot) 5-57 (1-57)
Uniprot ID P0DN34 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Q  
auth_asym_id E
Residue indices (Uniprot) 1-196 (1-274)
Uniprot ID Q9CR68 ￫UniprotKB
S-S bonds 144:160
label_asym_ids of heme None
Available structure PDB
Chain QA  
auth_asym_id 7
Residue indices (Uniprot) 1-96 (1-116)
Uniprot ID P52503 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain QB  
auth_asym_id g1
Residue indices (Uniprot) 21-121 (1-151)
Uniprot ID O09111 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain R  
auth_asym_id F
Residue indices (Uniprot) 10-110 (1-111)
Mutations (UniProt numbering) L61F
Uniprot ID Q9D855 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain RA  
auth_asym_id S1
Residue indices (Uniprot) 13-96 (1-99)
Uniprot ID Q9CQ75 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain RB  
auth_asym_id h1
Residue indices (Uniprot) 5-143 (1-189)
Uniprot ID Q9CQH3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain S  
auth_asym_id G
Residue indices (Uniprot) 2-78 (1-82)
Uniprot ID Q9CQ69 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain SA  
auth_asym_id T1
Residue indices (Uniprot) 6-84 (1-156)
Uniprot ID Q9CR21 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain SB  
auth_asym_id i1
Residue indices (Uniprot) 1-127 (1-128)
Structural gaps Exists
Nonstandard amino acids SAC Structure of SACSAC
Uniprot ID Q3UIU2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain T  
auth_asym_id H
Residue indices (Uniprot) 11-76 (1-89)
Uniprot ID P99028 ￫UniprotKB
S-S bonds 38:52
label_asym_ids of heme None
Available structure PDB
Chain TA  
auth_asym_id V1
Residue indices (Uniprot) 3-115 (1-116)
Uniprot ID Q9CPP6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain TB  
auth_asym_id j1
Residue indices (Uniprot) 5-69 (1-105)
Uniprot ID Q9CPU2 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain U  
auth_asym_id J
Residue indices (Uniprot) 2-61 (1-64)
Uniprot ID Q8R1I1 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain UA  
auth_asym_id W1
Residue indices (Uniprot) 17-130 (1-131)
Uniprot ID Q9CQZ5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain UB  
auth_asym_id k1
Residue indices (Uniprot) 18-94 (1-104)
Uniprot ID Q9CQZ6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain V  
auth_asym_id K
Residue indices (Uniprot) 2-53 (1-56)
Uniprot ID Q9CPX8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain VA  
auth_asym_id q1
Residue indices (Uniprot) 1-145 (1-145)
Uniprot ID Q7TMF3 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain VB  
auth_asym_id l1
Residue indices (Uniprot) 1-157 (1-186)
Uniprot ID Q9D6J5 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain W  
auth_asym_id L
Residue indices (Uniprot) 2-446 (1-480)
Uniprot ID Q9CZ13 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain WA  
auth_asym_id r1
Residue indices (Uniprot) 1-112 (1-113)
Missing residues 0MET-1ALA:77SER-89THR
Structural gaps Exists
Nonstandard amino acids AYA Structure of AYAAYA
Uniprot ID Q9Z1P6 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain WB  
auth_asym_id m1
Residue indices (Uniprot) 3-128 (1-129)
Uniprot ID Q9CQC7 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain X  
auth_asym_id M
Residue indices (Uniprot) 20-439 (1-453)
Uniprot ID Q9DB77 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain XA  
auth_asym_id s1
Residue indices (Uniprot) 27-68 (1-104)
Uniprot ID Q8BK30 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain XB  
auth_asym_id n1
Residue indices (Uniprot) 1-178 (1-179)
Uniprot ID Q9CQJ8 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB
Chain Y heme  
auth_asym_id N
Residue indices (Uniprot) 1-380 (1-381)
Uniprot ID P00158 ￫UniprotKB
label_asym_ids of heme HD ,  ID
Available structure PDB
Chain YA  
auth_asym_id A1
Residue indices (Uniprot) 1-115 (1-115)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03899 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.10 Å
Chain YB  
auth_asym_id o1
Residue indices (Uniprot) 1-118 (1-137)
Uniprot ID Q9CR61 ￫UniprotKB
S-S bonds 58:89,68:79
label_asym_ids of heme None
Available structure PDB
Chain Z heme  
auth_asym_id O
Residue indices (Uniprot) 1-240 (1-325)
Uniprot ID Q9D0M3 ￫UniprotKB
label_asym_ids of heme ND
Available structure PDB
Chain ZA  
auth_asym_id H1
Residue indices (Uniprot) 1-318 (1-318)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID P03888 ￫UniprotKB
label_asym_ids of heme None
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain ZB  
auth_asym_id p1
Residue indices (Uniprot) 2-171 (1-176)
Uniprot ID Q9DCS9 ￫UniprotKB
S-S bonds 112:124
label_asym_ids of heme None
Available structure PDB