Danish
PDB ID:  pdb_00008ugj
  • In-situ structure of typeB supercomplex in respiratory chain (composite)
  • Experimental method: ELECTRON MICROSCOPY
  • Resolution: unavailable
  • Deposition date: 2023-10-05
Number of assemblies:  1
Assembly ID:  0  (author_and_software_defined_assembly)    
Structural data including_not_modeled
Oligomeric count 95
label_asym_ids of protein
95 chains (6 with heme) A, AA, AB, AC, B, BA, BB, BC, C, CA, CB, CC, D, DA, DB, DC, E, EA, EB, EC, F, FA, FB, FC, G, GA, GB, GC, H, HA, HB, HC, I, IA, IB, IC, J, JA, JB, JC, K, KA, KB, KC, L, LA, LB, LC, M, MA, MB, MC, N, NA, NB, NC, O, OA, OB, OC, P, PA, PB, PC, Q, QA, QB, QC, R, RA, RB, S, SA, SB, T, TA, TB, U, UA, UB, V, VA, VB, W, WA, WB, X, XA, XB, Y, YA, YB, Z, ZA, ZB
label_asym_ids of heme CF DF EG FG GF HH IH QF RF UF
label_asym_ids of the others
show AD (SF4), AE (3PE), AF (3PE), AG (3PE), AH (PGV), AI (ZN), BD (SF4), BE (ZN), BF (3PE), BG (PGV), BH (PGV), BI (PGV), CD (FES), CE (EHZ), CG (PGV), CH (PGV), CI (PEK), DD (K), DE (CDL), DG (PGV), DH (PGV), DI (PO4), ED (CDL), EE (AYA), EF (3PE), EH (PGV), EI (PGV), FD (PC1), FE (3PE), FF (3PE), FH (PGV), FI (PGV), GD (PC1), GE (3PE), GG (CU), GH (PGV), GI (PGV), HD (SF4), HE (3PE), HF (3PE), HG (MG), ID (SF4), IE (3PE), IF (FES), IG (NA), JD (PC1), JE (3PE), JF (3PE), JG (PGV), JH (CU), KD (3PE), KE (PC1), KF (CDL), KG (PGV), KH (MG), LD (3PE), LE (3PE), LF (CDL), LG (CDL), LH (NA), MD (CDL), ME (PC1), MF (PC1), MG (CUA), MH (PGV), ND (3PE), NE (CDL), NF (3PE), NG (PSC), NH (PGV), OD (3PE), OE (AME), OF (CDL), OG (PGV), OH (CDL), PD (3PE), PE (CDL), PF (3PE), PG (PGV), PH (CUA), QD (PC1), QE (PC1), QG (PGV), QH (PSC), RC (3PE), RD (3PE), RE (CHD), RG (PGV), RH (PGV), SC (PC1), SD (PC1), SE (3PE), SF (3PE), SG (CDL), SH (PGV), TC (PC1), TD (3PE), TE (MYR), TF (CDL), TG (PGV), TH (PGV), UC (SF4), UD (3PE), UE (3PE), UG (PEK), UH (PGV), VC (PC1), VD (CDL), VE (EHZ), VF (FES), VG (CDL), VH (PGV), WC (PC1), WD (GTP), WE (PC1), WF (3PE), WG (ZN), WH (CDL), XC (FES), XD (MG), XE (AYA), XF (PC1), XG (PGV), XH (PGV), YC (FMN), YD (PC1), YE (CDL), YF (CDL), YG (PEK), YH (PEK), ZC (SF4), ZD (NDP), ZE (CDL), ZF (PC1), ZG (PO4), ZH (CDL)
Each chain information

Showing 6 chains with heme of 95. Show all chains

Chain DC heme  
auth_asym_id 8A
Residue indices (Uniprot) 1-514 (1-514)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID O79876 ￫UniprotKB
label_asym_ids of heme HH ,  IH
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.12 Å
Chain FB heme  
auth_asym_id 3P
Residue indices (Uniprot) 1-379 (1-379)
Mutations (UniProt numbering) G314S
Uniprot ID P24964 ￫UniprotKB
label_asym_ids of heme QF ,  RF
Available structure PDB
Chain GB heme  
auth_asym_id 3Q
Residue indices (Uniprot) 2-240 (1-326)
Uniprot ID A0A287AZF9 ￫UniprotKB
label_asym_ids of heme UF
Available structure PDB
Chain PB heme  
auth_asym_id 4A
Residue indices (Uniprot) 1-514 (1-514)
Missing residues 1MET-1MET
Nonstandard amino acids FME Structure of FMEFME
Uniprot ID O79876 ￫UniprotKB
label_asym_ids of heme EG ,  FG
Available structure PDB and Modeled
RMSD of experimental residues after energy minimization 0.11 Å
Chain VA heme  
auth_asym_id 3C
Residue indices (Uniprot) 1-379 (1-379)
Mutations (UniProt numbering) G314S
Uniprot ID P24964 ￫UniprotKB
label_asym_ids of heme CF ,  DF
Available structure PDB
Chain WA heme  
auth_asym_id 3D
Residue indices (Uniprot) 92-329 (1-326)
Uniprot ID A0A287AZF9 ￫UniprotKB
label_asym_ids of heme GF
Available structure PDB