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PDB ID: pdb_00009ifm

STRUCTURE OF UNSTACKED C2S2-TYPE PSII-LHCII SUPERCOMPLEX FROM PISUM SATIVUM
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposition date: 2025-02-18

Number of assemblies: 1

Assembly ID: 0 (author_and_software_defined_assembly)
Structural data	PDB
Oligomeric count	50
label_asym_ids of protein	50 chains (4 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, UA, V, VA, W, WA, X, XA, Y, Z
label_asym_ids of heme	EK TD
label_asym_ids of the others	show AB (CL), AC (CLA), AD (CLA), AE (CHL), AF (CHL), AG (LHG), AH (CHL), AI (LHG), AJ (CLA), AK (BCR), AL (BCR), AM (CHL), AN (LUT), BB (CL), BC (CLA), BD (CLA), BE (CHL), BF (CLA), BG (CHL), BH (CHL), BI (CLA), BJ (CLA), BK (PL9), BL (LMG), BM (CHL), BN (NEX), CB (CLA), CC (CLA), CD (BCR), CE (CHL), CF (CLA), CG (CLA), CH (CLA), CI (CLA), CJ (CLA), CK (LHG), CL (LHG), CM (CLA), CN (LHG), DB (CLA), DC (CLA), DD (BCR), DE (CLA), DF (CLA), DG (CLA), DH (CLA), DI (CLA), DJ (CLA), DK (LMG), DL (CHL), DM (CLA), DN (BCR), EB (PHO), EC (CLA), ED (BCR), EE (CLA), EF (CLA), EG (CLA), EH (CLA), EI (CLA), EJ (CLA), EL (CLA), EM (CLA), EN (LMG), FB (CLA), FC (BCR), FD (DGD), FE (CLA), FF (CLA), FG (CHL), FH (CLA), FI (CLA), FJ (CLA), FK (CHL), FL (CLA), FM (CLA), FN (LHG), GB (BCR), GC (BCR), GD (DGD), GE (CLA), GF (LUT), GG (CHL), GH (CLA), GI (CLA), GJ (CLA), GK (CLA), GL (CLA), GM (CLA), GN (NEX), HB (SQD), HC (BCR), HD (DGD), HE (CLA), HF (LUT), HG (CHL), HH (LUT), HI (CLA), HJ (CLA), HK (CLA), HL (CHL), HM (CLA), HN (CHL), IB (LMG), IC (SQD), ID (LMG), IE (LUT), IF (NEX), IG (CLA), IH (LUT), II (CLA), IJ (CLA), IK (CLA), IL (CHL), IM (LUT), IN (CLA), JB (PL9), JC (LMG), JD (LHG), JE (LUT), JF (LHG), JG (CLA), JH (XAT), JI (CLA), JJ (CLA), JK (CHL), JL (CHL), JM (XAT), JN (CLA), KB (LMG), KC (LHG), KD (LMG), KE (NEX), KF (CLA), KG (CLA), KH (NEX), KI (CLA), KJ (CLA), KK (CHL), KL (CHL), KM (NEX), KN (CLA), LB (SQD), LC (LHG), LD (CLA), LE (LHG), LF (CLA), LG (CLA), LH (LHG), LI (CLA), LJ (CLA), LK (CHL), LL (CHL), LM (LHG), LN (CHL), MB (BCT), MC (LMG), MD (PHO), ME (BCR), MF (CLA), MG (CLA), MH (DGD), MI (CLA), MJ (CLA), MK (CHL), ML (CLA), MM (CHL), MN (CHL), NB (LHG), NC (LHG), ND (CLA), NE (BCR), NF (CLA), NG (CLA), NH (OEX), NI (CLA), NJ (BCR), NK (CHL), NL (CLA), NM (CLA), NN (CHL), OB (DGD), OC (DGD), OD (CLA), OE (SQD), OF (CHL), OG (LUT), OH (FE2), OI (CLA), OJ (BCR), OK (CLA), OL (CLA), OM (CLA), ON (CHL), PB (CLA), PC (CLA), PD (BCR), PE (LHG), PF (CHL), PG (LUT), PH (CL), PI (CLA), PJ (DGD), PK (CLA), PL (CLA), PM (CLA), PN (CLA), QB (CLA), QC (CLA), QD (PL9), QE (SQD), QF (CHL), QG (LHG), QH (CL), QI (CLA), QJ (DGD), QK (CLA), QL (CLA), QM (CHL), QN (CLA), RB (CLA), RC (CLA), RD (LHG), RE (SQD), RF (CLA), RG (BCR), RH (CLA), RI (BCR), RJ (DGD), RK (CLA), RL (LUT), RM (CHL), RN (CLA), SB (CLA), SC (CLA), SD (LMG), SE (CHL), SF (CLA), SG (LHG), SH (CLA), SI (BCR), SJ (LHG), SK (CLA), SL (LUT), SM (CHL), SN (CLA), TB (CLA), TC (CLA), TE (CLA), TF (CLA), TG (CHL), TH (PHO), TI (BCR), TJ (LHG), TK (LUT), TL (NEX), TM (CLA), TN (CLA), UB (CLA), UC (CLA), UD (CHL), UE (CLA), UF (CLA), UG (CLA), UH (CLA), UI (LMG), UJ (LMG), UK (LUT), UL (LHG), UM (CLA), UN (LUT), VB (CLA), VC (CLA), VD (CLA), VE (CLA), VF (CLA), VG (CLA), VH (BCR), VI (LHG), VJ (CLA), VK (NEX), VL (CLA), VM (CLA), VN (LUT), WB (CLA), WC (CLA), WD (CLA), WE (CHL), WF (CLA), WG (CLA), WH (SQD), WI (LHG), WJ (PHO), WK (LHG), WL (CLA), WM (CLA), WN (XAT), XB (CLA), XC (CLA), XD (CLA), XE (CHL), XF (LUT), XG (CHL), XH (PL9), XI (LMG), XJ (BCT), XK (CHL), XL (CLA), XM (CLA), XN (NEX), YA (OEX), YB (CLA), YC (CLA), YD (CHL), YE (CHL), YF (XAT), YG (CHL), YH (LMG), YI (LHG), YJ (CLA), YK (BCR), YL (CLA), YM (CLA), YN (LHG), ZA (FE2), ZB (CLA), ZC (CLA), ZD (CHL), ZE (CHL), ZF (LHG), ZG (CHL), ZH (SQD), ZI (DGD), ZJ (CLA), ZK (BCR), ZL (CHL), ZM (LUT)

Each chain information

Showing all 50 chains (4 with heme). Show only chains with heme

Chain A
auth_asym_id	A
Residue indices (Uniprot)	11-344 (11-344)
Uniprot ID	P06585 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain AA
auth_asym_id	b
Residue indices (Uniprot)	2-504 (2-504)
Uniprot ID	D5MAL6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain B
auth_asym_id	B
Residue indices (Uniprot)	2-504 (2-504)
Uniprot ID	D5MAL6 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain BA
auth_asym_id	c
Residue indices (Uniprot)	24-473 (24-473)
Uniprot ID	P06004 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain C
auth_asym_id	C
Residue indices (Uniprot)	24-473 (24-473)
Uniprot ID	P06004 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain CA
auth_asym_id	d
Residue indices (Uniprot)	2-353 (2-353)
Uniprot ID	P06006 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain D
auth_asym_id	D
Residue indices (Uniprot)	2-353 (2-353)
Uniprot ID	P06006 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain DA heme
auth_asym_id	e
Residue indices (Uniprot)	8-82 (8-82)
Uniprot ID	P13554 ￫UniprotKB
label_asym_ids of heme	EK
Available structure	PDB

Chain E heme
auth_asym_id	E
Residue indices (Uniprot)	8-82 (8-82)
Uniprot ID	P13554 ￫UniprotKB
label_asym_ids of heme	TD
Available structure	PDB

Chain EA heme
auth_asym_id	f
Residue indices (Uniprot)	10-39 (10-39)
Mutations (UniProt numbering)	S26F
Uniprot ID	P62096 ￫UniprotKB
label_asym_ids of heme	EK
Available structure	PDB

Chain F heme
auth_asym_id	F
Residue indices (Uniprot)	10-39 (10-39)
Mutations (UniProt numbering)	S26F
Uniprot ID	P62096 ￫UniprotKB
label_asym_ids of heme	TD
Available structure	PDB

Chain FA
auth_asym_id	g
Residue indices (Uniprot)	13-228 (49-264)
Uniprot ID	P27490 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain G
auth_asym_id	G
Residue indices (Uniprot)	13-228 (49-264)
Uniprot ID	P27490 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain GA
auth_asym_id	h
Residue indices (Uniprot)	13-72 (13-72)
Uniprot ID	Q9XQR3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain H
auth_asym_id	H
Residue indices (Uniprot)	13-72 (13-72)
Uniprot ID	Q9XQR3 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain HA
auth_asym_id	i
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	D5MAJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain I
auth_asym_id	I
Residue indices (Uniprot)	1-34 (1-34)
Uniprot ID	D5MAJ9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain IA
auth_asym_id	j
Residue indices (Uniprot)	6-40 (6-40)
Uniprot ID	P13555 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain J
auth_asym_id	J
Residue indices (Uniprot)	6-40 (6-40)
Uniprot ID	P13555 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain JA
auth_asym_id	k
Residue indices (Uniprot)	25-61 (25-61)
Uniprot ID	D5MAJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain K
auth_asym_id	K
Residue indices (Uniprot)	25-61 (25-61)
Uniprot ID	D5MAJ8 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain KA
auth_asym_id	l
Residue indices (Uniprot)	3-38 (3-38)
Uniprot ID	P60147 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain L
auth_asym_id	L
Residue indices (Uniprot)	3-38 (3-38)
Uniprot ID	P60147 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain LA
auth_asym_id	m
Residue indices (Uniprot)	1-33 (1-33)
Uniprot ID	P69529 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain M
auth_asym_id	M
Residue indices (Uniprot)	1-33 (1-33)
Uniprot ID	P69529 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain MA
auth_asym_id	n
Residue indices (Uniprot)	13-228 (49-264)
Uniprot ID	P27490 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain N
auth_asym_id	N
Residue indices (Uniprot)	13-228 (49-264)
Uniprot ID	P27490 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain NA
auth_asym_id	o
Residue indices (Uniprot)	1-248 (82-329)
Uniprot ID	P14226 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain O
auth_asym_id	O
Residue indices (Uniprot)	1-248 (82-329)
Uniprot ID	P14226 ￫UniprotKB
S-S bonds	29:52
label_asym_ids of heme	None
Available structure	PDB

Chain OA
auth_asym_id	p
Residue indices (Uniprot)	1-186 (74-259)
Uniprot ID	P16059 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain P
auth_asym_id	P
Residue indices (Uniprot)	1-186 (74-259)
Uniprot ID	P16059 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain PA
auth_asym_id	q
Residue indices (Uniprot)	1-148 (87-234)
Uniprot ID	Q7Y1T5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain Q
auth_asym_id	Q
Residue indices (Uniprot)	1-148 (87-234)
Uniprot ID	Q7Y1T5 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain QA
auth_asym_id	r
Residue indices (Uniprot)	11-234 (11-234)
Uniprot ID	A0A2D0TCJ0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain R
auth_asym_id	R
Residue indices (Uniprot)	11-234 (11-234)
Uniprot ID	A0A2D0TCJ0 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain RA
auth_asym_id	s
Residue indices (Uniprot)	19-236 (63-280)
Uniprot ID	A0A9D5GXR9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain S
auth_asym_id	S
Residue indices (Uniprot)	19-236 (63-280)
Uniprot ID	A0A9D5GXR9 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain SA
auth_asym_id	t
Residue indices (Uniprot)	1-31 (1-31)
Uniprot ID	Q8HS25 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain T
auth_asym_id	T
Residue indices (Uniprot)	1-31 (1-31)
Uniprot ID	Q8HS25 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain TA
auth_asym_id	w
Residue indices (Uniprot)	1-54 (1-54)
Uniprot ID	A0A2D0TCJ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain U
auth_asym_id	W
Residue indices (Uniprot)	1-54 (1-54)
Uniprot ID	A0A2D0TCJ2 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain UA
auth_asym_id	x
Residue indices (Uniprot)	45-83 (45-83)
Uniprot ID	Q8VYY1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain V
auth_asym_id	X
Residue indices (Uniprot)	45-83 (45-83)
Uniprot ID	Q8VYY1 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain VA
auth_asym_id	y
Residue indices (Uniprot)	13-231 (50-268)
Uniprot ID	P07371 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain W
auth_asym_id	Y
Residue indices (Uniprot)	13-231 (50-268)
Uniprot ID	P07371 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain WA
auth_asym_id	z
Residue indices (Uniprot)	1-61 (1-61)
Uniprot ID	Q32902 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain X
auth_asym_id	Z
Residue indices (Uniprot)	1-61 (1-61)
Uniprot ID	Q32902 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB

Chain XA
auth_asym_id	u
Residue indices (Uniprot)	1-28 (80-107)
Uniprot ID	A0A9D4VSA9 ￫UniprotKB
S-S bonds	17:26
label_asym_ids of heme	None
Available structure	PDB

Chain Y
auth_asym_id	U
Residue indices (Uniprot)	72-99 (80-107)
Uniprot ID	A0A9D4VSA9 ￫UniprotKB
S-S bonds	88:97
label_asym_ids of heme	None
Available structure	PDB

Chain Z
auth_asym_id	a
Residue indices (Uniprot)	11-344 (11-344)
Uniprot ID	P06585 ￫UniprotKB
label_asym_ids of heme	None
Available structure	PDB