Danish

PDB ID: pdb_00009lk4

Cryo-EM structure of Lhcb4.1-C2S2 PSII-LHCII supercomplex from Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposition date: 2025-01-16

Number of assemblies: 1

Assembly ID: 0 (author_defined_assembly)
Structural data	including_not_modeled
Oligomeric count	46
label_asym_ids of protein	46 chains (4 with heme) A, AA, B, BA, C, CA, D, DA, E, EA, F, FA, G, GA, H, HA, I, IA, J, JA, K, KA, L, LA, M, MA, N, NA, O, OA, P, PA, Q, QA, R, RA, S, SA, T, TA, U, V, W, X, Y, Z
label_asym_ids of heme	CD VI
label_asym_ids of the others	show AB (LMG), AC (LHG), AD (PL9), AE (BCR), AF (CLA), AG (CHL), AH (CLA), AI (CLA), AJ (CHL), AK (CHL), AL (XAT), AM (CHL), AN (LUT), BB (DGD), BC (LMG), BD (LMG), BE (LHG), BF (CLA), BG (CLA), BH (CLA), BI (CLA), BJ (CHL), BK (CHL), BL (NEX), BM (CHL), BN (LUT), CB (SQD), CC (LHG), CE (LHG), CF (CHL), CG (CLA), CH (CLA), CI (CLA), CJ (CHL), CK (CLA), CL (LHG), CM (CHL), CN (NEX), DB (FE2), DC (LMG), DD (BCR), DE (SQD), DF (CHL), DG (CLA), DH (CLA), DI (CLA), DJ (CHL), DK (CLA), DL (LHG), DM (CLA), DN (LHG), EB (LHG), EC (CLA), ED (CHL), EE (SQD), EF (CHL), EG (CLA), EH (CLA), EI (CLA), EJ (CHL), EK (CLA), EL (XAT), EM (CLA), FB (LHG), FC (CLA), FD (CLA), FE (XAT), FF (CLA), FG (CLA), FH (CLA), FI (CLA), FJ (CLA), FK (CLA), FL (CHL), FM (CLA), GB (CLA), GC (CLA), GD (CLA), GE (CHL), GF (CLA), GG (LUT), GH (CLA), GI (BCR), GJ (CLA), GK (CLA), GL (CLA), GM (CLA), HB (CLA), HC (CLA), HD (CLA), HE (CLA), HF (CLA), HG (LUT), HH (CLA), HI (BCR), HJ (CLA), HK (LUT), HL (CLA), HM (CLA), IB (CLA), IC (CLA), ID (CHL), IE (CLA), IF (CLA), IG (NEX), IH (CLA), II (DGD), IJ (CLA), IK (LUT), IL (CLA), IM (CLA), JB (CLA), JC (CLA), JD (CHL), JE (CLA), JF (CLA), JG (LHG), JH (CLA), JI (LHG), JJ (CLA), JK (NEX), JL (CHL), JM (LUT), KB (CLA), KC (CLA), KD (CHL), KE (CHL), KF (CHL), KG (BCR), KH (CLA), KI (BCR), KJ (LUT), KK (LHG), KL (CHL), KM (LUT), LB (CLA), LC (CLA), LD (CHL), LE (CHL), LF (CLA), LG (CLA), LH (CLA), LI (PHO), LJ (LUT), LK (CLA), LL (CHL), LM (NEX), MB (CLA), MC (CLA), MD (CHL), ME (CHL), MF (LUT), MG (CLA), MH (CLA), MI (SQD), MJ (NEX), MK (CLA), ML (CHL), MM (LHG), NB (CLA), NC (CLA), ND (CLA), NE (CHL), NF (XAT), NG (CLA), NH (BCR), NI (BCT), NJ (LHG), NK (CLA), NL (CLA), NM (CHL), OB (CLA), OC (CLA), OD (CLA), OE (CHL), OF (NEX), OG (PHO), OH (BCR), OI (CLA), OJ (CHL), OK (CLA), OL (CLA), OM (CLA), PB (CLA), PC (CLA), PD (CLA), PE (CLA), PF (LHG), PG (CLA), PH (BCR), PI (CLA), PJ (XAT), PK (CHL), PL (CLA), PM (CLA), QB (CLA), QC (CLA), QD (CLA), QE (CLA), QF (LHG), QG (BCR), QH (LMG), QI (BCR), QJ (BCR), QK (CHL), QL (CLA), QM (CLA), RB (CLA), RC (BCR), RD (CLA), RE (CLA), RF (LHG), RG (LMG), RH (LHG), RI (PL9), RJ (BCR), RK (CHL), RL (CLA), RM (CHL), SB (CLA), SC (BCR), SD (LUT), SE (CLA), SF (XAT), SG (DGD), SH (LHG), SI (LHG), SJ (XAT), SK (CLA), SL (LUT), SM (CHL), TB (CLA), TC (DGD), TD (LUT), TE (CLA), TF (CHL), TG (SQD), TH (CLA), TI (LMG), TJ (CHL), TK (CLA), TL (LUT), TM (CHL), UA (CLA), UB (CLA), UC (LHG), UD (NEX), UE (LUT), UF (CLA), UG (FE2), UH (CLA), UI (DGD), UJ (CLA), UK (CLA), UL (NEX), UM (CLA), VA (CLA), VB (CLA), VC (CLA), VD (LHG), VE (LUT), VF (CLA), VG (LHG), VH (CLA), VJ (CLA), VK (CLA), VL (LHG), VM (CLA), WA (PHO), WB (BCR), WC (PHO), WD (CHL), WE (NEX), WF (CLA), WG (LHG), WH (CLA), WI (CHL), WJ (CLA), WK (CLA), WL (CHL), WM (CLA), XA (CLA), XB (BCR), XC (BCT), XD (XAT), XE (LHG), XF (CHL), XG (CLA), XH (CLA), XI (CLA), XJ (CHL), XK (CHL), XL (CLA), XM (CLA), YA (BCR), YB (BCR), YC (CLA), YD (BCR), YE (CLA), YF (CHL), YG (CLA), YH (CLA), YI (CLA), YJ (CHL), YK (CLA), YL (CLA), YM (CLA), ZA (SQD), ZB (LMG), ZC (CLA), ZD (DGD), ZE (CLA), ZF (CHL), ZG (CLA), ZH (CLA), ZI (CLA), ZJ (CHL), ZK (LUT), ZL (CLA), ZM (CLA)

Each chain information

Showing 4 chains with heme of 46. Show all chains

Chain AA heme
auth_asym_id	e
Residue indices (Uniprot)	16-81 (1-83)
Uniprot ID	P56779 ￫UniprotKB
label_asym_ids of heme	VI
Available structure	PDB

Chain BA heme
auth_asym_id	f
Residue indices (Uniprot)	10-38 (1-39)
Uniprot ID	P62095 ￫UniprotKB
label_asym_ids of heme	VI
Available structure	PDB

Chain E heme
auth_asym_id	E
Residue indices (Uniprot)	16-81 (1-83)
Uniprot ID	P56779 ￫UniprotKB
label_asym_ids of heme	CD
Available structure	PDB

Chain F heme
auth_asym_id	F
Residue indices (Uniprot)	10-38 (1-39)
Uniprot ID	P62095 ￫UniprotKB
label_asym_ids of heme	CD
Available structure	PDB